Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	T11b high vs low squamous_GSEA_Ranked
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	HALLMARK_HYPOXIA
Enrichment Score (ES)	0.3766922
Normalized Enrichment Score (NES)	2.1852589
Nominal p-value	0.0
FDR q-value	8.840587E-4
FWER p-Value	0.005

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Hmox1	55	2.684	0.0233	Yes
2	Serpine1	89	2.295	0.0468	Yes
3	Glrx	105	2.127	0.0724	Yes
4	Igfbp3	124	1.955	0.0949	Yes
5	Tgfbi	151	1.825	0.1136	Yes
6	Gpc1	155	1.783	0.1375	Yes
7	Cdkn1a	192	1.625	0.1509	Yes
8	Sdc3	196	1.610	0.1724	Yes
9	Plin2	217	1.534	0.1885	Yes
10	Dusp1	239	1.468	0.2036	Yes
11	Pkp1	257	1.434	0.2191	Yes
12	Pim1	262	1.425	0.2378	Yes
13	Ndrg1	276	1.380	0.2536	Yes
14	Ccng2	288	1.347	0.2694	Yes
15	Cxcr4	289	1.347	0.2880	Yes
16	Car12	306	1.274	0.3016	Yes
17	Col5a1	348	1.150	0.3073	Yes
18	Lox	352	1.139	0.3222	Yes
19	Atf3	373	1.107	0.3325	Yes
20	Ets1	396	1.061	0.3417	Yes
21	Plaur	426	1.012	0.3484	Yes
22	Mif	484	0.921	0.3470	Yes
23	Sult2b1	497	0.901	0.3564	Yes
24	Ppp1r15a	552	0.843	0.3546	Yes
25	Gcnt2	594	0.790	0.3553	Yes
26	Ndst1	609	0.756	0.3623	Yes
27	Rora	622	0.740	0.3695	Yes
28	Cited2	695	0.672	0.3609	Yes
29	Pgk1	717	0.655	0.3647	Yes
30	P4ha1	720	0.654	0.3732	Yes
31	Anxa2	760	0.620	0.3721	Yes
32	Maff	776	0.605	0.3767	Yes
33	Fam162a	909	0.527	0.3512	No
34	Ackr3	918	0.524	0.3564	No
35	Xpnpep1	947	0.507	0.3564	No
36	Ids	965	-0.501	0.3591	No
37	Hdlbp	984	-0.503	0.3616	No
38	Pklr	1212	-0.542	0.3127	No
39	Ilvbl	1274	-0.551	0.3051	No
40	Gaa	1539	-0.600	0.2478	No
41	Pgm1	1734	-0.635	0.2084	No
42	Siah2	1781	-0.644	0.2058	No
43	Irs2	1906	-0.674	0.1843	No
44	Nr3c1	2083	-0.712	0.1504	No
45	Gpc3	2218	-0.743	0.1273	No
46	Cp	2276	-0.756	0.1236	No
47	Pgm2	2316	-0.767	0.1245	No
48	Vldlr	2403	-0.792	0.1141	No
49	Eno3	2415	-0.794	0.1223	No
50	B3galt6	2717	-0.880	0.0596	No
51	Cdkn1c	2722	-0.882	0.0708	No
52	Hs3st1	2845	-0.921	0.0532	No
53	Gpc4	3169	-1.047	-0.0126	No
54	Fos	3189	-1.058	-0.0027	No
55	Akap12	3203	-1.066	0.0087	No
56	Prkca	3358	-1.142	-0.0138	No
57	Klhl24	3551	-1.247	-0.0443	No
58	Isg20	3663	-1.348	-0.0533	No
59	Ppargc1a	3701	-1.384	-0.0434	No
60	Nedd4l	3758	-1.449	-0.0373	No
61	Ankzf1	3772	-1.458	-0.0204	No
62	Dtna	3836	-1.581	-0.0143	No
63	Kdelr3	3903	-1.712	-0.0071	No
64	Pam	3917	-1.755	0.0139	No
65	Stc2	3990	-2.075	0.0246	No